Thesis Proposal and Homework

Some of you may be asking, “Where, oh where, has GoCorral gone? Where is the weekly update of his blog? There hasn’t even been a picture of his toenails to tell us he’s still alive!”

Well, I am still alive, I’ve just been rather busy with school these last few days.

Among my many responsibilities I have had:
1. A massive final project on homologous genes to the C. elegans myosin gene, unc-54, that is rapidly approaching 50 pages in length.
2. A final paper on intron retention being the first sign of speciation.
3. Scheduling and preparing my thesis proposal presentation.
4. Grading essays for the basic biology class I am teaching this semester.
5. All the usual stuff I have to do.

I’m keeping a good handle on #1 and #5. #4 is a slow truck that keeps on going.

Due to all the other stuff I’ve been doing #2 did not turn out as good as I would’ve liked. I loved the thesis of that paper, but I wish I’d used more time to find additional supporting evidence and described the supporting evidence in a better fashion.

#3 is the most exciting one! My thesis proposal presentation happened on Friday and was probably the most important moment in my career up to this point.

I got super nervous before giving the presentation and made a few mistakes in the preparation and delivery, but it still went quite well.

Every presentation should have at least one picture of a confused panda.
Every presentation should have at least one picture of a confused panda.

I passed the proposal which means I can continue on with my project! Woohoo! I do have to update my abstract to reflect my definite research goals which were outlined in the meeting.

That’s what I’ve been up to. There’s still more to do! I predict I’ll be done with most of it by the end of next week. After that, regular blog updates will resume.

-GoCorral

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Home Wish List

All the majesty of note paper made for teachers.
All the majesty of note paper made for teachers.

While cleaning out one of the moving boxes I found an old list of stuff my wife and I made.

The list is of things we wanted in our house and the list was made before we started looking for our house.

So here it is!

1. Two stories Check!
We got this one! Bedrooms and office on the second story. Everything else on the bottom floor.
2. A block or more away from a main road Check!
The reason for this one was to let the cats go outside unsupervised without worrying about them being run over on a main road.
3. A two car garage Check!
We won’t necessarily park both our cars in it (once we get another car), but its nice to have the option.
4. A big kitchen with a counter Check!
Our old place had a tiny kitchen without an island counter. Getting a big place to make meals feels great!
5. A dining room Check!
The old apartment had a tiny little section for the dining table that wasn’t really its own room. Our new house doesn’t have a dining room either, but it has two large places where the table can go (we’re using one of them).
6. Laundry Check! 
We’ve got a washing machine and a dryer! No more lugging clothes 300 feet to the laundry building in our complex or hoarding quarters like they’re more valuable than gold.
7. A backyard Check!
Yep! Got a real nice backyard that’s good for playing in with kids or for having meals during the summer.
8. A front yard Sort of.
We have landscaping in the front but I wouldn’t really call it a yard. Too many bushes and things. We could change it to have a yard though!
9. Solar panels Check!
The solar panels are sort of leased through a company. We don’t own the solar panels. A company does and they sell us the electricity they produce for about the same amount that PG&E charges. We then get reimbursed from PG&E for any excess electricity the panels produce. Odd way of doing it, but we are contributing to renewable energy with the panels!
10. Hardwood floors Sort of.
I’m allergic to dust which crops up in carpeted floors. Hardwood doesn’t collect dust the same way. We’ve got carpet on the second floor, but the bottom floor is tiled. That’s good enough for me.
11. Dance studio Sort of.
Not really present in the house. Instead we have a big mirror in the entrance hallway to the house that serves pretty much the same purpose. There’s plenty of space to dance there with a mirror to look at yourself even if it isn’t an official dance studio.
12. An office Check!
Yep! Writing this post in the office right now.
13. A big bath tub attached to the master bathroom No. 
Can’t have everything.
14. A pool No.
We didn’t get this one either, but that was a conscious choice. We looked at a house with a pool and it took up most of the backyard which we also wanted. Plus, the maintenance on a pool is pretty expensive.
15. Painted blue with white trim No.
We like the colors, but it isn’t blue with white trim. We could still repaint the house in the future.
16. A big tree for a swing or a tree house Check! 
The treehouse is actually a playhouse, but its basically what I wanted. All good!
17. A better HVAC system than our apartment Check!
Our old apartment had wall AC units and a heater that didn’t work (heater wasn’t that big an issue in Davis). One of the rooms never got AC. The new house has central heating and AC that both work great. We’ve also got a whole house fan which is a much more energy efficient method for cooling the house at night.
18. A fireplace Check!
Got a fireplace in the back living room. We haven’t used it yet but we probably will sometime next winter.
19. Big bedroom closets Check!
The closets aren’t as big as the walk-in one at the old apartment, but they’re still big enough for us.
20. Close to where my wife works Sort of. 
The house is about a mile and a half from the school where my wife works, so not as close as we originally wanted. This ended up being a good thing as my wife wanted to avoid seeing her students outside of school. Just a little tough to always have to be “on” as a teacher at the grocery store. We live in a different neighborhood than the school so none of the kids are around here.
21. Space for a garden Check!
There aren’t any planter boxes yet, but we’ll get some.

And that’s it! We got most of the stuff that we wanted and it feels pretty good.

-GoCorral

Last Day of Work

No More Work Keys
My keychain has four fewer keys on it now.

On Friday I had my last day of work at my old job in the rice lab.

It was a bit anticlimactic to leave because a lot of the people I wanted to say goodbye to weren’t there on my last day.

Still, my two supervisors were there. We went out for coffee and talked about my future plans.

It was kind of nice to talk to them as friends. I heard about their families and what their lives are like. I’d like to be in their place in a few years, minus the Chinese immigrant status.

I packed up all my stuff from my job: computer, lab pants, old cords, and old notebook.

I had to leave behind a few things as well like my keys, my new notebook, and a few data sheets that are probably irrelevant at this point.

The last few weeks at work have been a little boring.

I was originally hired to sequence the genome of rice leaves, but that project got passed on to other people.

I was then put on a project of organizing the huge database of rice seeds in the storage room (probably over 10,000 varieties of rice all thrown into cardboard boxes).

I finished that project in June.

For the past two months I’ve been keeping an eye on the rice plants in the greenhouse and doing regular maintenance stuff in the lab.

It wasn’t anything fancy, but it wasn’t particularly challenging either.

I started at my Master’s program today and I felt a lot better almost the instant I stepped on campus. I get to learn things again! I’m so excited!

While it was sad to leave my old job and even sadder that I left it with a whisper instead of a party, I’m psyched for what’s coming in the future!

-Mister Ed

Streaming and Stress

I’ve been thinking about all the things I’m doing with my website and how to balance that with the upcoming responsibility of graduate school.

Last year I was employed while my wife went to graduate school for her elementary school teaching credential.

At the beginning of September we’ll switch and I’ll  be going to graduate school for molecular biology while my wife teaches 5th grade at the neighborhood public school.

While I’m not stressed now with work, my day-to-day responsibilities, and all the other things I do for fun, that might change.

I saw what my wife went through for her graduate program. Her typical weekday was waking up at 6, leaving at 7:30, and not being done with her classes or her homework until 8PM.

If I have to do the same thing… I might not have time to do blog posts every day, stream every week, or improve the website and attached video channels as often.

I have to add descriptions to half these videos... So much work!!! #sarcasm
I have to add descriptions to half these videos… So much work!!! #sarcasm

Updates won’t stop, but I expect they will reduce in frequency.

I don’t want to make a commitment I can’t keep. I’ve already slipped a little bit on doing updates every weekday.

I usually miss a post because I’ve had a long day and don’t have the mental energy to write something worth reading.

Typically I make up a missed post on the weekend, but I’m still behind by two posts.

I’ll try to make those both up by September, but after that I think I’ll be switching to weekly updates.

I hope my schedule will allow me to write posts more often, but I can’t guarantee that until I’ve started my classes and know for sure what my workload will be.

-Mister Ed

Small Leg Injury

dammit, tim. 

So this afternoon I injured my leg. I took a picture of it, but it looks nasty. I decided you should get a picture of a beaver and his friends instead.

I hurt my leg while at work. It’s not broken or anything like that. I received a cut in a strange way.

You see we have these rolling tables at work for putting rice plants on at the greenhouse.

The tables are designed for maximum storage capacity. I’d guess that their dimensions are 5’x8′ (1.52mx2.44m).

The tables are supported by two long sliders.

Two rollers rest perpendicular along both sliders, one at each end.

The chain link fence material table then rests on top of that.

The rice plants then go on top of that.

The purpose of this is so that the table can roll back and forth.

There are four tables in the greenhouse, two on each side with a pathway through the middle.

The default position of the tables is to be rolled back against the walls.

The whole thing is designed to save horizontal space.

The tables can be rolled out into the pathway and one can go behind them to reach the plants on that side of the table.

It works great and its actually a lot of fun to roll the tables back and forth.

But since the whole thing is to save space, the greenhouse gets a little cramped.

Today while I was disposing of some old plants I rolled the table out to reach the back plants.

I placed my leg incorrectly and the table rolled over it, pinching my skin.

The injury looks kind of weird. Like a mix between a bruise and a snake bite. I think it looks most like the head of this guy from Star Wars.

Anyways, kinda nasty.

A lot of other cool stuff has been happening lately too. Father’s Day for one!

More posts on that stuff soon.

-Mister Ed

Lab Construction Work

The new shelves where rice seeds for the sequencing project I work on will be stored.
The new shelves where rice seeds for the sequencing project I work on will be stored.

Yesterday I got home pretty tired after work.

The picture above is what I did at work. I made some shelves and put some boxes on them. That took all day.

The shelves came in five different cardboard boxes.

The lab manager and I put the shelves together in the hallway because there isn’t enough room for it on the floor in this room. That took about an hour.

We pushed the shelves in after putting them together. Everyone laughed thinking that we couldn’t fit them through the door. SHOWED THEM DIDN’T WE?!?

The shelves are seven feet tall. They’ll be holding the thousands of different varieties of seed in those boxes on them.

Next, the lab manager wanted to construct another set of shelves for other lab storage.

This other shelf had to fit into a space taken up by even more shelves.

The lab manager, another lab guy, and I spent half an hour shoving the other shelves around until there was just enough room to squeeze the new set of shelves in.

The lab manager started putting together that other shelf while I and the other lab guy worked on those boxes you can see in the picture.

Each box holds more than a hundred varieties of seed. Some hold close to 600.

These seeds were stored in ordinary cardboard boxes previously. Like the kind that you pack your stuff in when you move.

This storage was pretty unorganized. Our job is to sort them out and put them into the new boxes which will be much more organized.

So I spent all day taking envelopes of rice seeds from one box, writing down what the envelopes said on an Excel sheet, and putting the envelope into a new box.

It is WAY more ordered now. Previously, it’d take 5 minutes to find a particular variety of seed. When we’re done it’ll take 5 seconds.

I worked my way through one cardboard moving box and was on my second when the day finished.

The other lab worker and I got through about 1,000 seed varieties each. Lots more boxes to go through though!

This taste of the more mundane side of lab life was brought to you by the talking horse.

-Mister Ed

Little Presents

A love note that my wife left on my bike while I was working.
A love note that my wife left on my bike while I was working.

My wife does sweet things for me all the time. This was a note she left for me on my bike while I was inside my lab working. She taped it around the crossbar. It had been raining a little bit, so when I went to my bike to go home the note had tiny wet spots on it. It was the best part of my day.

Last week we played a game. We went into the closet where it was super dark and made acrostic poems for each other with a flashlight. Acrostics are those poems where the first letter of each line spells something out.
Big
Old
Aged
Tugger
Would be BOAT for example.

My wife and I have a thing for Tim Allen’s TV show, Last Man Standing. One of the most recent episodes focused on Tim Allen’s character’s non-observance of Valentine’s. His character feels like Valentine’s is a holiday invented by FTD florists and chocolate companies, and thus not worth actually celebrating. I’ve heard that same thing from a few of my friends before as well. “Why do I need a special day to show my love for my partner?”

The special day is nice because my wife and I try even harder to please each other with gifts, attention, and time spent together. We still do special things for each other every day.

Like, a month or two ago I made a scavenger hunt for my wife. I put little riddles all around the house. The solved riddle lead to the next riddle. The final riddle said that I had her prize, a new set of headphones for her.

Just wanted to remind you all that Valentine’s isn’t the only day for love, but there’s no good reason it shouldn’t be one of the more memorable ones.

That’s all!

-Mister Ed